Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013697.1 Corchorus capsularis cultivar CVL-1 contig13718, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57105

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10032--10594
22
25.7
22
68
15
197
36
14
9
40
1.78
10719--10768
22
2.4
21
80
9
66
42
10
4
44
1.56
10728--11095
22
16.5
22
69
12
133
35
16
9
39
1.80
11182--11244
22
2.9
22
85
0
90
36
14
14
34
1.86
11180--11288
22
5.0
21
75
8
83
35
15
11
36
1.85
12341--12379
20
2.0
20
94
0
69
61
2
5
30
1.31
12623--12686
31
2.1
31
85
5
87
50
3
18
28
1.62
20790--20873
41
2.0
41
93
4
143
30
11
17
39
1.86
21465--21497
2
16.5
2
100
0
66
51
0
0
48
1.00
41246--41274
14
2.0
15
93
6
51
0
20
27
51
1.47
42627--42730
26
4.0
26
77
14
108
53
9
1
34
1.45
42627--42744
52
2.4
51
79
13
122
54
10
1
33
1.44
42997--43043
21
2.1
23
84
7
62
42
8
34
14
1.77
45669--45707
13
2.9
13
92
3
60
43
2
5
48
1.38
49024--49061
17
2.2
18
85
4
51
28
23
13
34
1.92

Tables:   1

The End!