Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013701.1 Corchorus capsularis cultivar CVL-1 contig13722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50068

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
482--620
31
4.8
31
76
16
145
16
20
25
36
1.94
15704--15734
1
31.0
1
100
0
62
100
0
0
0
0.00
20645--20678
2
17.0
2
100
0
68
50
0
0
50
1.00
33292--33444
80
1.9
80
87
0
225
41
24
5
28
1.76
35031--35300
110
2.4
110
90
6
411
38
11
1
48
1.50
37840--37885
20
2.2
21
92
3
76
26
6
17
50
1.70
38922--38946
10
2.5
10
100
0
50
52
16
0
32
1.44
41896--41978
41
2.0
41
95
0
148
26
22
16
33
1.96
48402--48435
2
17.0
2
100
0
68
0
50
0
50
1.00

Tables:   1

The End!