Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013702.1 Corchorus capsularis cultivar CVL-1 contig13723, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74886

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29119--29167
25
2.0
24
88
7
73
51
6
14
28
1.66
29688--29721
16
2.1
16
94
0
59
26
11
14
47
1.79
34120--34150
16
1.9
16
100
0
62
25
12
25
35
1.92
42986--43032
23
2.1
22
84
4
58
72
4
12
10
1.25
60424--60482
30
1.9
30
83
10
75
33
22
11
32
1.90
66568--66630
6
11.0
6
74
16
62
47
1
17
33
1.57
66575--66606
15
2.1
15
100
0
64
53
0
12
34
1.39
66640--66664
13
1.9
13
100
0
50
56
0
20
24
1.43
66785--66809
10
2.5
10
100
0
50
32
8
52
8
1.60
70620--70726
53
2.0
53
96
0
196
41
12
6
40
1.68
73793--73822
15
2.0
15
93
0
51
20
10
26
43
1.83

Tables:   1

The End!