Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013708.1 Corchorus capsularis cultivar CVL-1 contig13729, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13439

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3106--3134
12
2.3
13
94
5
51
10
0
27
62
1.28
3777--3810
17
2.0
17
88
0
50
64
14
0
20
1.28
4533--4576
22
2.0
22
82
8
54
54
20
0
25
1.45
4623--4867
122
2.0
122
94
0
427
18
33
12
36
1.88
9210--9234
13
1.9
13
100
0
50
32
24
20
24
1.98
9244--9374
32
4.1
32
85
0
172
16
21
32
29
1.95
9570--9614
23
2.0
23
95
0
81
24
15
28
31
1.96

Tables:   1

The End!