Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013709.1 Corchorus capsularis cultivar CVL-1 contig13730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17953

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1209--1235
13
2.1
13
100
0
54
62
14
0
22
1.31
5923--6074
74
2.1
74
93
2
261
21
30
8
39
1.83
10887--10974
16
5.6
16
82
9
110
5
14
42
37
1.70
10887--10974
31
2.8
32
81
10
110
5
14
42
37
1.70
10963--11000
12
3.2
12
81
7
51
5
18
42
34
1.73
11842--11879
6
6.5
6
82
17
53
0
18
47
34
1.49
14045--14111
35
1.9
35
90
3
109
20
13
17
47
1.81
14775--14840
30
2.2
31
86
2
89
27
22
6
43
1.76

Tables:   1

The End!