Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013710.1 Corchorus capsularis cultivar CVL-1 contig13731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28388

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12957--13001
2
22.5
2
100
0
90
51
0
0
48
1.00
13722--13794
25
2.9
25
89
6
112
36
20
10
31
1.87
22322--22347
12
2.2
12
100
0
52
38
7
15
38
1.76
22439--22495
25
2.3
25
96
3
107
33
14
7
45
1.71
26407--26440
2
17.0
2
100
0
68
50
0
0
50
1.00
27878--27920
2
23.0
2
86
13
65
53
0
0
46
1.00
27878--27920
14
3.0
15
93
6
72
53
0
0
46
1.00

Tables:   1

The End!