Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013713.1 Corchorus capsularis cultivar CVL-1 contig13734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22854

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3293--3333
21
1.9
22
85
14
59
53
14
4
26
1.61
9105--9153
25
2.0
25
95
0
89
44
22
24
8
1.79
18990--19141
72
2.1
72
100
0
304
34
21
28
15
1.94
19181--19249
18
3.8
18
82
3
77
31
23
20
24
1.98
19184--19288
6
17.0
6
73
5
66
32
23
20
22
1.98
19220--19296
39
2.0
39
100
0
154
33
24
20
20
1.97
19604--19724
60
2.1
58
90
7
192
33
20
27
19
1.96
19850--19897
24
2.0
24
83
0
60
35
18
25
20
1.95
20278--20312
6
6.0
6
86
6
54
0
17
0
82
0.66
20280--20317
12
3.2
12
85
7
51
0
18
2
78
0.86
21321--21400
28
2.7
29
83
11
83
32
18
25
23
1.97
22318--22387
31
2.3
30
80
7
79
25
17
27
30
1.97

Tables:   1

The End!