Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013716.1 Corchorus capsularis cultivar CVL-1 contig13737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31139

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
238--277
6
6.8
6
82
5
55
82
17
0
0
0.67
236--271
17
2.3
15
90
9
54
83
16
0
0
0.65
4480--4614
69
2.0
69
96
0
252
20
39
14
26
1.90
4485--4634
69
2.2
69
87
2
212
22
37
16
24
1.93
19707--19731
13
1.9
13
100
0
50
96
0
4
0
0.24
20067--20102
6
5.8
6
90
6
54
0
13
2
83
0.76
22664--22734
37
1.9
36
91
2
115
54
12
1
30
1.46
30427--30481
3
18.3
3
88
0
74
1
40
0
58
1.09

Tables:   1

The End!