Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013717.1 Corchorus capsularis cultivar CVL-1 contig13738, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45818

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--45
2
15.5
2
100
0
62
48
0
0
51
1.00
2752--2818
32
2.1
32
97
0
125
44
16
14
23
1.85
11555--11617
29
2.2
29
91
0
99
47
15
14
22
1.81
23416--23456
20
2.0
20
100
0
82
29
4
14
51
1.63
23421--23466
20
2.3
20
84
0
56
28
6
23
41
1.79
28927--29020
48
2.0
47
91
6
156
17
41
17
24
1.89
28939--29031
48
1.9
48
91
0
150
19
39
16
24
1.91
31531--31575
1
45.0
1
100
0
90
0
0
0
100
0.00
33784--33925
70
2.0
72
94
4
252
30
25
7
35
1.84
40557--40605
25
2.0
25
95
0
89
42
8
12
36
1.72
44979--45009
16
1.9
16
93
0
53
64
6
19
9
1.45
45419--45681
107
2.5
106
89
3
379
41
7
9
41
1.65

Tables:   1

The End!