Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013720.1 Corchorus capsularis cultivar CVL-1 contig13741, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27392

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1180--1219
18
2.2
18
86
0
53
37
47
2
12
1.55
3074--3796
360
2.0
360
98
0
1392
33
22
24
19
1.97
8551--8603
28
1.9
28
88
3
81
56
5
13
24
1.58
9221--9263
20
2.1
21
86
4
61
20
18
20
39
1.93
10035--10079
24
2.0
22
83
12
56
42
13
6
37
1.70
13727--13772
1
46.0
1
86
0
65
0
0
6
93
0.35
16073--16097
3
8.3
3
100
0
50
68
0
32
0
0.90
24372--24470
31
3.2
30
77
8
92
33
25
21
20
1.97
25154--25226
25
2.9
25
97
0
137
45
6
23
24
1.77
25715--25747
2
16.5
2
100
0
66
48
0
0
51
1.00
27354--27390
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!