Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013721.1 Corchorus capsularis cultivar CVL-1 contig13742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28699

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5196--5222
2
13.5
2
100
0
54
48
0
0
51
1.00
5766--6135
109
3.5
108
90
5
576
40
8
8
42
1.66
14803--14833
12
2.6
12
94
0
53
51
16
9
22
1.73
15155--15189
2
17.5
2
100
0
70
48
0
0
51
1.00
17117--17156
20
2.0
20
85
9
55
25
22
17
35
1.95
21025--21129
52
2.0
52
96
0
192
30
8
23
37
1.85
24962--24992
1
31.0
1
100
0
62
100
0
0
0
0.00
25281--25320
2
20.5
2
84
5
55
45
5
0
50
1.23
26433--26459
2
13.5
2
100
0
54
51
0
0
48
1.00
27806--28145
183
1.9
180
88
4
511
41
7
12
37
1.73

Tables:   1

The End!