Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013725.1 Corchorus capsularis cultivar CVL-1 contig13746, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29000

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2214--2338
63
2.0
63
98
0
241
35
25
8
31
1.85
5776--5814
17
2.2
17
86
9
51
33
0
53
12
1.39
8347--8383
17
2.2
17
95
0
65
27
13
37
21
1.91
11252--11311
23
2.6
23
89
0
93
46
6
15
31
1.71
11270--11301
16
1.9
17
93
6
57
50
6
12
31
1.65
14898--14999
49
2.1
49
98
0
195
37
14
20
27
1.92
17557--17716
80
2.0
80
96
0
293
49
20
1
28
1.59
20337--20370
13
2.8
12
86
8
50
0
0
11
88
0.52
20332--20373
18
2.5
16
85
11
57
0
0
11
88
0.53
27148--27636
22
22.6
22
77
6
437
37
13
16
33
1.87
27148--27636
108
4.5
107
77
7
386
37
13
16
33
1.87
27657--28513
335
2.6
331
80
6
951
37
15
15
32
1.88

Tables:   1

The End!