Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013728.1 Corchorus capsularis cultivar CVL-1 contig13749, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20084

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5466--5504
15
2.4
15
87
12
51
15
12
7
64
1.49
9737--9780
20
2.1
22
87
8
65
43
25
13
18
1.86
9782--9818
3
12.3
3
100
0
74
67
0
32
0
0.91
15539--15590
27
1.9
27
88
0
77
44
9
15
30
1.78
16696--16766
24
3.0
24
77
4
63
47
1
45
5
1.35
16747--16842
30
3.2
31
80
7
117
48
3
40
7
1.46
16811--16970
84
1.9
83
84
6
205
45
10
34
10
1.72

Tables:   1

The End!