Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013732.1 Corchorus capsularis cultivar CVL-1 contig13753, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22238

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3504--3545
22
1.9
23
85
9
61
30
21
11
35
1.90
4028--4097
27
2.6
28
81
6
90
35
12
18
32
1.89
8501--8568
27
2.5
28
83
7
95
29
13
23
33
1.93
15576--15622
22
2.1
23
84
4
60
31
4
8
55
1.49
15656--15691
19
2.0
17
89
10
54
27
0
11
61
1.30
15836--15881
21
2.1
22
84
11
60
36
8
41
13
1.75
18111--18186
39
1.9
40
84
7
102
11
17
13
57
1.64

Tables:   1

The End!