Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013734.1 Corchorus capsularis cultivar CVL-1 contig13755, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27752

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6432--6473
2
21.5
2
95
4
77
0
47
0
52
1.00
7719--7772
25
2.2
25
93
0
90
33
16
9
40
1.80
11497--11587
27
3.3
27
66
11
76
41
3
21
32
1.70
11462--12171
54
12.9
55
87
5
912
48
5
19
27
1.70
11797--11938
27
5.3
27
63
15
78
50
4
21
23
1.68
11958--12108
30
5.3
29
64
10
87
50
4
18
25
1.66
12140--12199
28
2.1
30
87
6
88
56
5
15
23
1.58
12211--12380
39
4.4
39
68
24
110
47
7
17
28
1.73
12193--12418
58
3.9
58
93
0
362
46
6
16
29
1.72
12242--12401
19
8.3
18
68
22
71
46
8
15
30
1.74
12966--12996
6
5.3
6
92
7
55
19
16
16
48
1.81
14175--14229
20
2.7
20
80
2
56
34
20
43
1
1.62
15625--15672
18
2.6
17
76
20
51
4
41
16
37
1.68
15628--15682
20
2.7
20
88
2
74
5
45
18
30
1.72
17578--17660
19
4.3
19
70
27
68
33
16
6
43
1.73
17551--17667
58
2.0
57
93
1
198
29
17
5
47
1.71
17663--17722
28
2.1
29
81
12
70
23
15
6
55
1.64
17691--18399
54
12.9
54
87
6
884
27
19
5
48
1.70
17924--18065
27
5.3
27
63
15
78
23
21
4
50
1.68
17695--18399
109
6.4
109
85
8
900
27
19
5
48
1.70
18274--18364
27
3.3
27
67
11
85
32
20
3
42
1.69
26937--26978
2
21.5
2
95
4
77
52
0
47
0
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27697--27752
2
28.0
2
100
0
112
50
0
50
0
1.00

Tables:   1

The End!