Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013737.1 Corchorus capsularis cultivar CVL-1 contig13758, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45316

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3320--3350
2
15.5
2
100
0
62
51
0
0
48
1.00
11582--11625
21
2.1
21
100
0
88
50
22
0
27
1.50
21238--21506
29
9.4
29
79
15
301
20
16
23
40
1.91
21234--21484
28
8.9
26
80
16
252
20
15
23
40
1.91
21234--21506
57
4.8
57
97
0
501
20
16
23
39
1.91
21576--21648
36
2.0
37
91
2
121
24
19
26
30
1.98
32584--32624
6
6.8
6
94
0
64
51
29
19
0
1.47
32955--33045
39
2.4
38
82
10
105
35
3
46
15
1.62
33277--33402
42
3.0
42
97
0
234
44
19
24
11
1.83
33946--34110
21
8.1
21
78
8
162
24
27
27
21
1.99
34028--34101
36
2.1
36
94
0
130
21
29
27
21
1.99
41226--41349
41
3.1
41
68
15
134
18
9
25
46
1.79
41195--41351
77
2.0
77
100
0
314
17
8
24
49
1.75
42930--42962
2
16.5
2
100
0
66
0
48
0
51
1.00
43676--43732
28
2.0
28
93
0
96
33
17
21
28
1.96

Tables:   1

The End!