Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013738.1 Corchorus capsularis cultivar CVL-1 contig13759, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22828

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4105--4142
2
19.0
2
100
0
76
50
0
0
50
1.00
6263--6287
13
1.9
13
100
0
50
24
8
24
44
1.80
9298--9330
6
5.5
6
100
0
66
54
15
0
30
1.41
10249--10273
10
2.5
10
100
0
50
24
8
20
48
1.76
17761--17890
61
2.1
61
98
1
253
32
21
9
36
1.85
20198--20249
2
26.5
2
88
3
79
46
3
0
50
1.20
22077--22114
19
2.0
20
89
5
60
31
13
7
47
1.71

Tables:   1

The End!