Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013740.1 Corchorus capsularis cultivar CVL-1 contig13761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29063

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5294--5323
15
2.0
15
100
0
60
13
33
33
20
1.91
5345--5441
48
2.0
48
95
0
176
16
19
31
31
1.94
5618--5697
6
13.3
6
95
0
79
17
45
0
37
1.49
5645--5701
3
19.0
3
88
0
87
28
38
0
33
1.57
6589--6695
53
2.0
53
94
0
187
42
11
5
40
1.64
7037--8052
438
2.3
443
79
5
1101
43
12
12
31
1.79
15265--15312
20
2.4
21
83
13
57
41
20
18
18
1.90
15643--15775
66
2.0
66
95
0
239
36
21
12
30
1.90
16270--16295
3
8.7
3
100
0
52
34
0
0
65
0.93
16678--16756
40
2.0
39
85
4
106
30
13
15
40
1.86
19727--19762
18
2.0
18
88
0
54
36
41
13
8
1.75
19873--19915
12
3.6
12
83
0
59
11
18
53
16
1.72
28618--28754
68
2.0
67
97
1
256
30
11
18
39
1.86

Tables:   1

The End!