Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013742.1 Corchorus capsularis cultivar CVL-1 contig13763, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11985

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3583--3652
34
2.1
34
100
0
140
50
14
0
35
1.43
6207--6278
36
2.0
36
97
0
135
25
26
13
34
1.93
9466--9540
27
2.8
27
91
2
116
69
9
9
12
1.37
9742--9771
3
10.0
3
100
0
60
33
0
0
66
0.92
10950--11068
60
2.0
61
94
1
213
31
15
16
36
1.91
11280--11313
8
4.1
8
92
3
50
58
14
0
26
1.36
11348--11394
22
2.1
23
88
4
69
57
8
2
31
1.41
11359--11408
22
2.3
22
82
6
57
60
6
2
32
1.32
11372--11410
15
2.6
15
83
0
51
56
5
2
35
1.35
11425--11516
33
2.8
32
83
4
130
10
32
31
25
1.90
11742--11954
70
3.0
71
97
2
403
40
16
12
29
1.86

Tables:   1

The End!