Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013743.1 Corchorus capsularis cultivar CVL-1 contig13764, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9807

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45--124
29
2.7
29
90
3
115
41
12
17
28
1.86
1501--1527
9
3.0
9
100
0
54
11
11
22
55
1.66
1919--1977
31
1.9
31
85
0
82
32
6
20
40
1.78
4861--4898
3
12.7
3
100
0
76
31
0
0
68
0.90
5055--5111
29
2.0
29
92
0
96
24
14
22
38
1.91
5057--5118
29
2.1
29
87
0
88
24
14
25
35
1.93
7147--7403
127
2.0
125
83
7
315
27
17
10
43
1.83
9371--9408
2
19.5
2
94
5
69
50
0
0
50
1.00
9374--9407
17
2.0
17
100
0
68
47
0
0
52
1.00

Tables:   1

The End!