Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013754.1 Corchorus capsularis cultivar CVL-1 contig13775, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34481

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10655--10681
5
5.4
5
100
0
54
0
22
18
59
1.38
10874--10970
47
2.1
47
90
3
151
35
15
11
38
1.83
10990--11043
26
2.1
26
100
0
108
46
14
12
25
1.81
15110--15271
31
5.5
31
75
13
146
16
24
25
33
1.96
15191--15232
22
1.9
22
95
0
75
21
16
23
38
1.93
15160--15262
53
1.9
53
84
0
134
18
19
25
36
1.94
21683--21774
45
2.0
45
100
0
184
25
6
25
43
1.78
22814--22913
31
3.3
30
72
16
89
28
17
15
40
1.89
33356--33381
7
3.7
7
100
0
52
0
11
0
88
0.52

Tables:   1

The End!