Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013757.1 Corchorus capsularis cultivar CVL-1 contig13778, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4496

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--563
201
2.8
200
90
2
841
35
13
17
33
1.89
1142--1172
16
1.9
16
93
0
53
54
0
9
35
1.33
1605--1674
37
2.0
34
86
10
97
28
10
22
38
1.87
2075--2113
19
2.1
19
100
0
78
20
30
5
43
1.73
3114--3151
19
2.1
18
95
5
67
18
10
5
65
1.41
4385--4421
18
2.1
18
89
0
56
18
2
2
75
1.04

Tables:   1

The End!