Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013758.1 Corchorus capsularis cultivar CVL-1 contig13779, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11914

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--370
190
1.9
188
81
10
436
35
13
17
34
1.89
783--813
16
1.9
16
93
0
53
54
0
9
35
1.33
3839--3999
86
1.9
86
94
2
288
45
5
15
33
1.70
3934--4203
75
3.6
75
92
2
443
40
7
17
34
1.77
3846--4203
150
2.3
156
86
8
496
42
6
17
33
1.75
7746--7784
14
2.7
14
88
4
51
41
7
15
35
1.76
8119--8169
27
2.0
26
88
7
77
70
1
19
7
1.21
8350--8426
37
2.1
37
85
7
104
36
14
11
37
1.82
9597--10221
35
17.9
35
86
4
570
28
16
19
34
1.94
11419--11649
85
2.7
85
96
0
417
39
5
18
37
1.73

Tables:   1

The End!