Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013761.1 Corchorus capsularis cultivar CVL-1 contig13782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35156

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8455--8481
6
4.5
6
100
0
54
55
14
0
29
1.40
9412--9436
10
2.5
10
100
0
50
24
8
20
48
1.76
10603--10666
31
2.1
31
96
0
119
48
1
28
21
1.59
10765--10796
2
16.0
2
100
0
64
50
0
0
50
1.00
11794--11829
19
1.9
18
88
5
54
41
2
22
33
1.68
14273--14429
78
2.0
78
98
0
305
31
7
19
42
1.79
17283--17315
15
2.2
15
94
0
57
36
0
45
18
1.49
21950--22012
15
4.0
16
84
8
76
6
33
3
57
1.40
21962--22006
16
2.8
17
86
10
67
6
33
2
57
1.37
21962--22008
17
2.9
16
90
6
69
6
31
2
59
1.34
29970--30011
19
2.2
19
100
0
84
23
33
23
19
1.97
32568--32635
35
2.0
35
88
8
106
23
11
7
57
1.59

Tables:   1

The End!