Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013762.1 Corchorus capsularis cultivar CVL-1 contig13783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67295

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18727--18926
100
2.0
100
93
0
337
32
18
18
31
1.94
28454--28544
45
2.0
45
89
0
137
20
27
3
48
1.65
34646--34771
63
2.0
63
100
0
252
38
15
20
25
1.92
39018--39083
18
3.5
18
73
18
71
7
10
6
75
1.17
39018--39081
17
3.5
17
73
19
65
7
9
6
76
1.15
49332--49366
2
18.0
2
88
5
54
51
0
0
48
1.00
49323--49368
23
2.0
23
91
0
74
47
0
0
52
1.00
50551--50583
3
11.0
3
100
0
66
66
0
0
33
0.92
50582--50614
3
11.0
3
93
0
57
33
30
3
33
1.73
56151--56184
2
17.0
2
100
0
68
50
0
0
50
1.00
59954--60197
122
2.0
122
100
0
488
40
9
10
40
1.71
60979--61005
2
13.5
2
100
0
54
48
0
0
51
1.00
61189--61218
14
2.1
14
93
0
51
63
3
6
26
1.35
61569--61625
21
2.6
22
83
10
73
57
0
1
40
1.09
62458--62517
31
1.9
31
86
0
84
35
28
13
23
1.92

Tables:   1

The End!