Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013764.1 Corchorus capsularis cultivar CVL-1 contig13785, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40437

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4582--4628
24
2.0
24
83
8
60
14
10
4
70
1.31
18781--19842
440
2.4
436
87
3
1473
26
13
17
41
1.87
21489--21528
20
2.0
20
100
0
80
30
0
15
55
1.41
24421--24447
12
2.2
12
100
0
54
14
7
22
55
1.64
24723--24749
13
2.1
13
100
0
54
22
33
0
44
1.53
26789--26814
1
26.0
1
100
0
52
100
0
0
0
0.00
28625--28682
28
2.1
28
100
0
116
39
10
13
36
1.79
30695--30737
21
2.0
21
100
0
86
39
23
9
27
1.85
38984--39018
18
1.9
18
88
0
52
28
25
14
31
1.95
40227--40298
30
2.4
31
90
2
110
30
15
16
37
1.90

Tables:   1

The End!