Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013766.1 Corchorus capsularis cultivar CVL-1 contig13787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32101

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2480--2509
14
2.1
14
93
0
51
40
13
16
30
1.87
9725--9758
11
3.1
11
100
0
68
61
0
0
38
0.96
9725--9757
6
5.8
6
86
13
52
63
0
0
36
0.95
9796--11001
602
2.0
602
96
0
2234
30
17
11
40
1.85
11894--11941
23
2.1
23
100
0
96
29
12
20
37
1.90
13875--13914
2
20.0
2
94
0
71
50
47
0
2
1.14
16466--16509
23
1.9
23
95
0
79
34
11
18
36
1.86
17970--18043
36
2.1
36
92
0
121
39
20
8
32
1.82
28316--28381
30
2.3
28
89
5
96
40
7
13
37
1.73
29037--29108
31
2.3
30
76
4
72
30
15
22
31
1.94
30729--30795
31
2.2
31
86
7
93
32
20
16
29
1.95
31698--31729
15
2.2
15
94
5
57
40
18
18
21
1.91
32052--32095
2
22.0
2
100
0
88
50
0
50
0
1.00

Tables:   1

The End!