Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001377.1 Corchorus capsularis cultivar CVL-1 contig01377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6970

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
174--349
17
11.8
16
69
25
93
39
9
0
50
1.38
162--379
44
4.9
44
84
5
262
39
9
0
50
1.38
166--521
13
24.4
13
66
22
106
38
10
0
50
1.41
157--351
88
2.2
88
94
0
336
39
8
0
51
1.37
190--343
27
5.3
29
74
19
126
38
8
0
51
1.37
964--1003
21
2.0
20
85
5
53
15
10
22
52
1.71
3564--3730
67
2.5
67
95
0
289
29
31
16
22
1.96
6777--6806
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!