Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013777.1 Corchorus capsularis cultivar CVL-1 contig13798, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35526

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3493--3522
15
2.1
14
93
6
51
36
10
20
33
1.86
4610--4720
52
2.1
51
77
8
116
36
14
10
37
1.81
18089--18129
22
1.9
22
85
5
57
73
9
12
4
1.24
22126--22260
45
3.0
45
98
0
261
34
20
20
24
1.96
23877--24002
21
6.0
21
85
5
157
26
11
23
38
1.88
24044--24104
21
2.9
21
92
0
95
24
16
21
37
1.93
25508--25538
14
2.1
15
94
5
55
3
19
0
77
0.90
27310--27339
15
2.0
15
93
0
51
43
20
10
26
1.83
27500--27536
18
2.1
18
94
0
65
16
35
10
37
1.83
28690--28716
14
1.9
14
100
0
54
66
7
7
18
1.40
35418--35480
27
2.3
27
84
10
76
44
1
6
47
1.38
35486--35526
2
20.5
2
100
0
82
51
0
0
48
1.00

Tables:   1

The End!