Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013786.1 Corchorus capsularis cultivar CVL-1 contig13807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11158

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1189--1215
13
2.1
13
100
0
54
22
7
7
62
1.46
1220--1246
6
4.5
6
100
0
54
29
0
14
55
1.40
1653--1735
41
2.0
41
86
6
116
31
10
2
55
1.47
6467--6548
33
2.5
33
100
0
164
21
40
26
10
1.87
7283--7317
10
3.7
9
88
11
52
82
0
0
17
0.66
9295--9401
33
3.2
33
88
2
144
10
28
38
22
1.87

Tables:   1

The End!