Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013789.1 Corchorus capsularis cultivar CVL-1 contig13810, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27877

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
268--317
24
2.0
25
84
3
66
66
8
0
26
1.19
268--319
25
2.1
25
82
7
61
65
7
0
26
1.20
1975--2076
30
3.4
30
79
2
89
18
10
29
41
1.84
2031--2214
53
3.4
53
82
9
203
19
14
27
39
1.90
2750--3052
154
2.0
154
84
2
403
41
17
18
22
1.90
3214--3533
165
1.9
166
86
3
457
39
17
14
29
1.88
4136--4160
8
3.1
8
100
0
50
0
12
24
64
1.27
12055--12100
10
4.7
10
82
10
51
23
26
10
39
1.88
12051--12092
21
2.0
20
90
4
66
23
21
11
42
1.86
15402--15450
16
3.1
16
90
0
80
6
12
36
44
1.67
15402--15476
31
2.4
32
84
2
89
9
10
37
42
1.72
20935--20972
6
6.5
6
96
3
69
31
0
13
55
1.38

Tables:   1

The End!