Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013791.1 Corchorus capsularis cultivar CVL-1 contig13812, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32222

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
324--373
18
2.8
18
84
0
64
58
10
0
32
1.31
330--393
28
2.3
30
76
15
73
53
9
1
35
1.43
324--380
18
3.2
18
73
14
55
57
10
0
31
1.32
455--502
21
2.2
22
85
10
64
56
4
0
39
1.19
4389--4422
7
4.9
7
100
0
68
73
0
0
26
0.83
8214--8244
16
1.9
16
100
0
62
19
6
6
67
1.35
8286--8334
16
3.1
16
82
11
73
6
14
36
42
1.70
8274--8342
31
2.2
31
89
5
104
5
15
40
37
1.72
9676--9717
2
21.5
2
86
13
61
45
2
0
52
1.13
12103--12139
18
2.1
18
89
0
56
13
32
0
54
1.40
18918--19010
11
7.1
14
65
22
58
33
2
8
55
1.42
18949--19016
26
2.6
26
86
9
102
33
1
10
54
1.43
19025--19084
25
2.5
25
89
5
88
43
0
21
35
1.53
23286--23367
34
2.5
33
82
7
103
45
15
3
35
1.64

Tables:   1

The End!