Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013794.1 Corchorus capsularis cultivar CVL-1 contig13815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2130

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--170
35
4.8
35
81
8
155
20
20
2
56
1.55
250--512
26
9.8
26
80
15
290
15
20
7
55
1.65
250--539
53
5.5
51
84
11
288
16
19
7
56
1.64
252--512
81
3.2
81
90
7
385
16
20
8
55
1.65
532--817
56
5.2
56
94
2
490
25
18
8
47
1.76
1525--1723
51
3.8
50
77
7
209
39
18
3
39
1.66
1470--1704
102
2.2
105
80
11
266
39
17
3
39
1.67
1524--1723
102
1.9
103
85
5
278
39
19
3
39
1.67
1708--1762
20
2.8
19
86
5
74
34
16
12
36
1.87

Tables:   1

The End!