Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000138.1 Corchorus capsularis cultivar CVL-1 contig00138, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1334

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
224--393
14
12.4
14
66
19
65
21
22
5
50
1.70
238--318
21
3.9
20
78
10
74
24
23
6
45
1.75
388--455
26
2.6
27
81
6
68
26
19
4
50
1.66
428--497
32
2.2
32
87
7
97
22
18
5
52
1.66
487--542
16
3.1
17
72
22
60
17
25
3
53
1.60
533--688
40
3.9
40
96
0
285
21
22
5
50
1.68
748--774
14
1.9
14
100
0
54
7
14
3
74
1.18
770--833
16
4.1
16
78
8
69
17
21
4
56
1.59
743--816
36
2.2
32
84
13
89
16
17
4
62
1.48
624--877
110
2.2
115
84
4
329
17
20
6
55
1.63
934--1079
37
3.9
38
75
19
148
28
19
6
45
1.74
1111--1204
38
2.4
39
82
3
109
22
21
6
50
1.71

Tables:   1

The End!