Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013801.1 Corchorus capsularis cultivar CVL-1 contig13822, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20255

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
254--294
15
2.8
14
85
10
55
0
12
2
85
0.70
258--293
9
3.9
9
85
7
54
0
11
2
86
0.68
257--292
19
1.9
19
88
5
56
0
11
2
86
0.68
7505--7546
21
2.0
21
100
0
84
47
9
19
23
1.78
13461--13531
32
2.3
30
90
7
108
35
21
28
15
1.94
13547--13684
31
4.5
31
79
3
107
18
22
26
32
1.97
13544--13681
62
2.2
62
84
0
177
18
23
26
31
1.97
14359--14399
22
1.9
21
85
5
55
17
41
7
34
1.77

Tables:   1

The End!