Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013811.1 Corchorus capsularis cultivar CVL-1 contig13832, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36828

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1281--1318
3
13.0
3
94
5
69
65
0
0
34
0.93
1283--1322
17
2.4
17
95
4
73
67
0
0
32
0.91
1276--1322
20
2.4
19
89
10
76
65
0
0
34
0.93
3715--3769
6
9.0
6
84
4
65
38
1
0
60
1.08
4175--4219
22
2.0
22
95
0
81
53
17
13
15
1.73
5950--5994
22
2.0
22
91
0
72
53
15
15
15
1.74
9357--9394
20
1.9
19
85
15
51
44
21
5
28
1.73
14920--14953
7
4.9
7
100
0
68
29
41
0
29
1.57
24650--24708
16
3.6
16
75
11
57
72
1
23
1
1.02
26870--26931
2
29.5
2
87
9
88
45
0
6
48
1.28
26870--26931
19
3.3
18
86
8
88
45
0
6
48
1.28
33343--33379
14
2.6
14
91
0
56
67
10
0
21
1.21
33358--33486
66
2.0
66
95
0
231
45
13
3
37
1.59
33523--33559
15
2.4
15
90
4
56
72
2
8
16
1.19

Tables:   1

The End!