Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013812.1 Corchorus capsularis cultivar CVL-1 contig13833, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24479

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
905--938
2
17.0
2
100
0
68
50
0
0
50
1.00
2126--2156
12
2.6
12
94
0
53
48
12
32
6
1.67
7686--7710
11
2.3
11
100
0
50
68
16
16
0
1.22
14914--14953
20
2.0
20
100
0
80
40
15
10
35
1.80
15739--15794
25
2.2
25
87
6
78
41
1
5
51
1.35
23020--23076
29
1.9
30
82
10
73
49
15
3
31
1.62
23104--23161
27
2.1
27
100
0
116
36
6
25
31
1.83

Tables:   1

The End!