Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013817.1 Corchorus capsularis cultivar CVL-1 contig13838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21533

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--218
35
3.1
34
77
7
112
52
4
18
24
1.64
110--324
35
6.0
35
77
11
107
54
3
20
21
1.59
210--324
7
15.7
7
70
9
52
57
1
21
19
1.50
218--349
36
3.6
36
89
2
201
57
3
21
17
1.53
4136--4185
24
2.2
22
89
10
75
12
2
8
78
1.05
18493--18569
28
2.8
28
91
0
118
42
24
12
19
1.86
18776--19200
123
3.5
123
81
10
454
40
15
20
23
1.91
18787--19198
58
6.8
62
79
10
382
40
15
20
23
1.91
19414--19552
70
2.0
69
84
1
179
35
23
20
20
1.95
19501--19601
49
2.1
49
90
0
157
36
25
17
19
1.94
19430--19691
119
2.2
119
92
0
425
37
22
19
20
1.94
19660--19783
35
3.5
35
79
0
122
45
17
16
20
1.86
19696--19801
35
3.0
35
79
5
108
42
17
16
22
1.89
19769--19825
29
2.0
29
89
0
87
40
17
17
24
1.91
20831--20894
29
2.2
29
81
8
69
9
20
1
68
1.25

Tables:   1

The End!