Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: AWWV01013825.1 Corchorus capsularis cultivar CVL-1 contig13846, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2827
ACGTcount: A:0.29, C:0.24, G:0.15, T:0.33


Found at i:1164 original size:1 final size:1

Alignment explanation


    Indices: 1160--1197  Score: 76
    Period size: 1  Copynumber: 38.0  Consensus size: 1

       1150 TTAGGCCCAG

                                                  
       1160 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
          1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

       1198 AGGCATAATA


Statistics
Matches: 37,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   1   37  1.00

ACGTcount: A:0.00, C:0.00, G:0.00, T:1.00


Consensus pattern (1 bp):   
T

Done.