Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013829.1 Corchorus capsularis cultivar CVL-1 contig13850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3863

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3044--3134
23
4.1
23
80
9
100
19
16
7
56
1.64
3110--3165
15
3.9
15
72
9
53
16
23
5
55
1.61
3146--3233
21
4.1
21
75
10
72
21
22
6
48
1.73
3214--3302
35
2.5
35
85
0
115
20
20
10
49
1.77
3457--3522
31
2.1
31
88
8
98
27
18
6
48
1.71
3532--3664
47
2.5
53
72
20
136
23
15
9
51
1.73
3587--3665
26
3.2
26
67
29
82
24
15
8
51
1.71
3554--3713
47
3.4
47
92
0
259
23
20
10
46
1.80

Tables:   1

The End!