Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013831.1 Corchorus capsularis cultivar CVL-1 contig13852, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35878

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
819--903
30
2.8
30
87
0
116
21
17
24
36
1.94
12500--12543
23
1.9
23
95
0
79
13
34
22
29
1.93
21033--21095
12
5.2
12
79
7
65
65
22
6
6
1.39
21036--21089
23
2.4
22
81
3
63
66
22
3
7
1.33
33034--33085
2
25.0
2
76
7
50
40
11
0
48
1.40
33908--34121
109
2.0
104
87
6
304
34
10
8
45
1.70
34179--34211
17
1.9
17
93
0
57
45
3
15
36
1.61
34263--34289
6
4.5
6
100
0
54
85
0
14
0
0.61
34689--34722
16
2.2
16
89
5
52
32
8
5
52
1.56

Tables:   1

The End!