Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013835.1 Corchorus capsularis cultivar CVL-1 contig13856, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26986

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
483--513
15
2.0
16
93
6
55
58
0
0
41
0.98
11789--11844
28
2.0
28
96
0
103
23
7
16
53
1.67
11871--11927
24
2.4
24
81
16
73
12
1
22
63
1.38
11873--11928
25
2.3
25
87
9
80
10
1
23
64
1.35
12114--12155
20
2.0
21
86
4
59
19
45
7
28
1.76
12670--12926
130
2.0
130
100
0
514
38
21
10
29
1.87
19633--19664
11
2.9
11
90
0
55
37
0
18
43
1.51
21017--21055
6
6.7
6
91
2
62
33
2
12
51
1.54
21073--21102
15
2.0
15
93
0
51
13
10
6
70
1.34
21351--21387
17
2.2
17
95
0
65
51
8
21
18
1.72
25951--25982
11
2.9
11
90
0
55
37
0
18
43
1.51

Tables:   1

The End!