Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013839.1 Corchorus capsularis cultivar CVL-1 contig13860, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12575

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3897--4138
60
4.0
59
89
3
299
32
48
7
11
1.67
3888--4126
30
8.0
30
76
8
227
33
48
6
11
1.66
4858--4906
11
4.5
11
84
7
64
67
0
2
30
1.02
4858--4906
21
2.3
22
83
16
68
67
0
2
30
1.02
4961--5000
16
2.6
16
96
4
73
27
27
5
40
1.77
6325--6362
16
2.3
17
83
16
53
21
10
18
50
1.76

Tables:   1

The End!