Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013843.1 Corchorus capsularis cultivar CVL-1 contig13864, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7707

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1461--1517
25
2.2
25
84
3
69
28
12
15
43
1.83
1849--1876
14
2.0
14
100
0
56
50
0
14
35
1.43
3662--3761
49
2.0
49
96
0
182
34
19
10
37
1.85
4218--4264
22
2.1
22
100
0
94
31
4
12
51
1.59
4311--4365
18
3.3
18
80
19
82
49
5
9
36
1.58
4332--4358
14
1.9
14
100
0
54
51
7
0
40
1.30
4496--6289
591
3.0
595
95
2
3203
37
15
9
37
1.81

Tables:   1

The End!