Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013844.1 Corchorus capsularis cultivar CVL-1 contig13865, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22009

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--31
2
15.5
2
100
0
62
51
0
0
48
1.00
816--915
22
4.5
22
84
2
112
43
14
11
32
1.80
946--1000
22
2.5
22
84
0
65
40
7
18
34
1.78
1120--1253
66
2.0
66
84
2
171
32
9
17
39
1.83
1050--1273
44
5.1
43
70
11
148
31
10
17
40
1.83
1050--1270
22
10.0
21
72
13
124
31
9
18
40
1.83
1150--1293
66
2.2
66
84
3
182
33
11
15
40
1.82
1214--1293
22
3.6
21
74
14
63
35
10
15
40
1.80
2858--2890
16
2.0
17
88
5
50
51
0
0
48
1.00
5820--6355
99
5.4
100
78
8
474
28
21
12
37
1.90
5888--6355
198
2.3
198
89
1
702
29
22
12
36
1.90
9602--9882
99
2.9
99
92
1
451
25
21
12
39
1.89
16967--16996
6
5.0
6
100
0
60
0
16
0
83
0.65
17505--17558
27
2.0
27
96
0
99
53
1
14
29
1.52
17502--17550
14
3.6
14
75
5
55
55
2
14
28
1.51
17863--17900
11
3.5
11
89
10
51
39
0
2
57
1.12
18461--18488
13
2.2
13
100
0
56
28
32
14
25
1.94

Tables:   1

The End!