Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013847.1 Corchorus capsularis cultivar CVL-1 contig13868, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39109

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3440--3464
2
12.5
2
100
0
50
52
0
0
48
1.00
8952--8990
17
2.3
17
86
0
51
25
0
2
71
0.98
10156--10195
17
2.4
17
91
0
62
67
2
0
30
1.04
14481--14517
6
6.2
6
100
0
74
48
32
0
18
1.49
16043--16150
36
3.0
36
100
0
216
36
8
16
38
1.79
17581--17608
9
3.1
9
100
0
56
0
25
64
10
1.26
20287--20325
20
1.9
21
85
15
55
56
7
10
25
1.59
20815--20899
2
40.5
2
83
13
100
44
1
5
48
1.34
21048--21233
92
2.0
93
94
1
329
39
8
4
47
1.54
22182--22206
2
12.5
2
100
0
50
48
0
0
52
1.00
28420--28482
31
2.1
30
87
3
90
25
22
14
38
1.92
31059--31091
12
2.6
13
85
9
50
0
48
0
51
1.00
35026--35233
104
1.9
107
91
5
341
30
20
16
32
1.95
35416--35462
11
4.2
11
84
13
60
63
2
0
34
1.06
36709--36744
16
2.2
16
90
0
54
47
13
2
36
1.58

Tables:   1

The End!