Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013851.1 Corchorus capsularis cultivar CVL-1 contig13872, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9582

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1583--1738
80
2.0
77
90
6
242
22
12
25
40
1.88
2083--2251
51
3.3
51
87
0
239
38
7
15
38
1.76
3019--3144
38
3.3
38
82
2
137
48
7
18
25
1.75
3402--3474
25
2.9
25
85
6
85
56
0
16
27
1.41
3434--3677
25
10.1
26
70
16
134
54
2
21
21
1.56
3407--3665
51
5.4
50
67
21
142
55
1
20
22
1.53
3592--3665
26
2.9
26
74
8
71
54
1
17
27
1.51
3363--3732
95
4.0
94
87
7
526
54
1
20
23
1.55
3679--3732
25
2.0
27
89
10
85
50
0
20
29
1.49
3363--3749
94
4.2
92
82
10
423
54
1
20
22
1.54

Tables:   1

The End!