Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013852.1 Corchorus capsularis cultivar CVL-1 contig13873, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15643

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
518--575
29
2.0
29
100
0
116
31
20
13
34
1.92
1895--1957
16
4.4
16
67
29
52
53
3
22
20
1.59
1882--1996
40
2.9
40
97
2
214
53
2
21
21
1.57
2040--2122
32
2.5
33
84
13
125
54
3
18
24
1.59
2055--2144
26
3.2
26
80
13
92
52
4
17
25
1.64
2147--2222
14
5.4
14
76
9
75
55
5
21
18
1.62
2136--2218
28
2.9
29
82
13
100
56
3
20
19
1.56
2172--2232
14
4.4
13
72
13
50
54
6
19
19
1.66
2269--2296
14
2.0
14
100
0
56
50
7
21
21
1.72
2428--2496
22
3.2
22
81
2
86
50
4
23
21
1.66
6523--6553
16
1.9
16
93
0
53
74
0
3
22
0.96

Tables:   1

The End!