Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013853.1 Corchorus capsularis cultivar CVL-1 contig13874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9280

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3858--3938
40
2.2
36
78
21
96
51
3
22
22
1.63
3985--4067
32
2.5
33
81
13
116
54
4
16
24
1.62
4041--4092
26
2.0
26
92
7
88
53
3
15
26
1.59
4089--4240
14
11.0
14
67
18
68
51
6
23
18
1.69
4089--4160
28
2.6
27
80
8
83
52
4
25
18
1.62
4110--4194
42
2.0
44
86
4
120
54
5
21
18
1.65
4262--4313
22
2.4
22
87
3
70
46
7
25
21
1.77
4213--4301
35
2.5
35
76
3
99
49
5
25
19
1.70
4357--4406
14
3.4
14
80
5
55
56
2
24
18
1.52
4373--4441
22
3.2
22
78
10
79
50
5
23
20
1.69

Tables:   1

The End!