Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013856.1 Corchorus capsularis cultivar CVL-1 contig13877, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8274

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
260--359
14
7.3
14
71
18
68
54
6
20
20
1.65
319--363
14
3.2
14
93
6
74
51
6
22
20
1.70
355--525
43
4.0
41
80
9
166
46
3
24
25
1.68
421--471
25
2.0
25
92
0
84
54
0
19
25
1.44
355--505
42
3.6
43
82
7
150
47
2
24
25
1.65
448--488
17
2.4
17
83
0
55
51
0
19
29
1.47
370--525
85
1.8
85
81
2
197
46
3
24
26
1.68
452--564
59
1.9
59
85
8
158
49
3
22
24
1.65
495--547
16
3.2
16
73
5
52
50
5
18
24
1.68
555--585
15
2.1
15
93
0
53
64
0
16
19
1.29

Tables:   1

The End!